To cite tima in publications use:

Rutz A, Allard P (2026). tima: Taxonomically Informed Metabolite Annotation. doi:10.5281/zenodo.5797920. R package, version 2.13.0.

Adriano Rutz; Miwa Dounoue-Kubo; et al. (25 October 2019). Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation. Frontiers in Plant Science. 10: 1329.<doi:10.3389/FPLS.2019.01329>. issn:1664-462X. pmc:PMC6824209. pmid:1708947. qid:Q91218352.

Corresponding BibTeX entries:

  @Manual{,
    title = {tima: Taxonomically Informed Metabolite Annotation},
    author = {Adriano Rutz and Pierre-Marie Allard},
    year = {2026},
    note = {R package, version 2.13.0},
    doi = {10.5281/zenodo.5797920},
  }

  @Article{,
    title = {Taxonomically Informed Scoring Enhances Confidence in
      Natural Products Annotation},
    author = {Adriano Rutz and Miwa Dounoue-Kubo and Simon Ollivier and
      Jonathan Bisson and Mohsen Bagheri and Tongchai Saesong and Samad
      Nejad Ebrahimi and Kornkanok Ingkaninan and Jean-Luc Wolfender
      and Pierre-Marie Allard},
    journal = {Frontiers in Plant Science},
    year = {2019},
    volume = {10},
    url = {https://doi.org/10.3389/fpls.2019.01329},
    language = {en},
    keywords = {metabolite annotation, chemotaxonomy, scoring system,
      natural products, computational metabolomics, taxonomic distance,
      specialized metabolome},
    doi = {10.3389/FPLS.2019.01329},
    issn = {1664-462X},
    pmc = {PMC6824209},
    pmid = {1708947},
    qid = {Q91218352},
  }