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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GenomicRanges" in publications use:'
type: software
license: Artistic-2.0
title: 'GenomicRanges: Representation and manipulation of genomic intervals'
version: 1.57.1
doi: 10.1371/journal.pcbi.1003118
identifiers:
- type: doi
  value: 10.32614/CRAN.package.GenomicRanges
abstract: The ability to efficiently represent and manipulate genomic annotations
  and alignments is playing a central role when it comes to analyzing high-throughput
  sequencing data (a.k.a. NGS data). The GenomicRanges package defines general purpose
  containers for storing and manipulating genomic intervals and variables defined
  along a genome. More specialized containers for representing and manipulating short
  alignments against a reference genome, or a matrix-like summarization of an experiment,
  are defined in the GenomicAlignments and SummarizedExperiment packages, respectively.
  Both packages build on top of the GenomicRanges infrastructure.
authors:
- family-names: Aboyoun
  given-names: Patrick
- family-names: Pagès
  given-names: Hervé
  email: hpages.on.github@gmail.com
- family-names: Lawrence
  given-names: Michael
preferred-citation:
  type: article
  title: Software for Computing and Annotating Genomic Ranges
  authors:
  - family-names: Lawrence
    given-names: Michael
  - family-names: Huber
    given-names: Wolfgang
  - family-names: Pag\`es
    given-names: Herv\'e
  - family-names: Aboyoun
    given-names: Patrick
  - family-names: Carlson
    given-names: Marc
  - family-names: Gentleman
    given-names: Robert
  - family-names: Morgan
    given-names: Martin
  - family-names: Carey
    given-names: Vincent
  year: '2013'
  journal: PLoS Computational Biology
  volume: '9'
  issue: '8'
  doi: 10.1371/journal.pcbi.1003118
  url: http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003118
repository: https://taxonomicallyinformedannotation.r-universe.dev
repository-code: https://github.com/Bioconductor/GenomicRanges
commit: 2b7bf7d519a2091652ceef6d6c47e3aaa1030900
url: https://bioconductor.org/packages/GenomicRanges
contact:
- family-names: Pagès
  given-names: Hervé
  email: hpages.on.github@gmail.com